Information for 1-CACTGCCAGGATA (Motif 1)

A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
Reverse Opposite:
A C G T C T G A G A C T A G T C G T A C A C G T A C T G A T C G G T A C C G T A A C T G A C G T C T A G
p-value:1e-16
log p-value:-3.862e+01
Information Content per bp:1.783
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.1 +/- 20.5bp
Average Position of motif in Background36.6 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CACTGCCAGGATA
CAATCACTGGCAGAAT-
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CACTGCCAGGATA
--TTGCCAAG---
 A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACTGCCAGGATA
CACTTCCGGGTT-
 A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T A C G T

ELF1/MA0473.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACTGCCAGGATA
NACTTCCGGGTT-
 A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T

ELF3/MA0640.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACTGCCAGGATA
TTACTTCCGGGTT-
 A C G T A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
G A C T G A C T C T G A G A T C C G A T A C G T T G A C A G T C A C T G A T C G A T C G C G A T C G A T A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACTGCCAGGATA
CCAACTGCCA-----
 A C G T A C G T A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T

EHF/MA0598.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACTGCCAGGATA
TACTTCCGGGTT-
 A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
G A C T C T G A A G T C A C G T C A G T A G T C A G T C A C T G A T C G A T C G C G A T C G A T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CACTGCCAGGATA-
----ANCAGGATGT
 A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A A C G T
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CACTGCCAGGATA
---TGCCAA----
 A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACTGCCAGGATA
-CGTGCCAAG---
 A G T C C G T A G T A C C G A T A C T G A T G C G T A C C G T A A C T G A C T G C T G A A G C T G T C A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T