Information for 25-AGTAWGAAYSRGTGCA (Motif 52)

C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C C G T A A G T C A G C T A T C G C T A G A C G T A C G T A T G C C G A T A C G T C G T A A G T C A C G T
p-value:1e-4
log p-value:-9.229e+00
Information Content per bp:1.884
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.5 +/- 23.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGTAWGAAYSRGTGCA----
----GGGCCGTGTGCAAAAA
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGTAWGAAYSRGTGCA
NTTNTATGAATGTGNNC-
 A C G T A C G T C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.49
Offset:5
Orientation:forward strand
Alignment:AGTAWGAAYSRGTGCA
-----AAATCACTGC-
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:AGTAWGAAYSRGTGCA------
-----NTNTATGTGCACATNNN
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.47
Offset:5
Orientation:forward strand
Alignment:AGTAWGAAYSRGTGCA
-----AAATCACAGCA
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AGTAWGAAYSRGTGCA
ACTATGAATGAATGAT
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PH0110.1_Nkx1-2/Jaspar

Match Rank:7
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:AGTAWGAAYSRGTGCA-
TGNACTAATTAGTGNAN
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A A C G T
C G A T T A C G G A T C T G C A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A G C T A C T G T G A C G T C A G T A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:AGTAWGAAYSRGTGCA-
-NNAGGGACAAGGGCNC
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:AGTAWGAAYSRGTGCA------
-----NNGTATGTGCACATNNN
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.45
Offset:3
Orientation:forward strand
Alignment:AGTAWGAAYSRGTGCA----
---ATCCACAGGTGCGAAAA
 C G T A A C T G A C G T C G T A C G T A A T C G C G T A G T C A A G T C A T G C C T G A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A