Information for 17-AAATTCATAC (Motif 50)

C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.253e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.3 +/- 23.8bp
Average Position of motif in Background49.5 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AAATTCATAC---
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AAATTCATAC-
GGACTGAATTCATGCC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAATTCATAC----
ACATTCATGACACG
 C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAATTCATAC-
AAAAAATCGATAAT
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAATTCATAC
GAATATTCAT--
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAATTCATAC
GHATATKCAT--
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAATTCATAC-----
NNCATTCATTCATNNN
 A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAATTCATAC-
AAAAAATCGATAAT
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAATTCATAC--
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAATTCATAC-
AAAAAATCAATAAT
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T