Information for 14-CATCATAAAG (Motif 46)

A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.459e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.3 +/- 22.8bp
Average Position of motif in Background62.7 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CATCATAAAG--
NGYCATAAAWCH
 A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXC10/MA0905.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CATCATAAAG-
-GTCGTAAAAT
 A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CATCATAAAG--
TATCATAATTAAGGA
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATCATAAAG
-GCAATAAAA
 A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATCATAAAG-
-GTCATAAAAN
 A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATCATAAAG-
-GTCGTAAAAA
 A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CATCATAAAG--
GGTCGTAAAATT
 A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CATCATAAAG
ATTTGCATAACAAAG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATCATAAAG---
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATCATAAAG---
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T