Information for 15-CTTCATGMAACTA (Motif 36)

A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
Reverse Opposite:
A G C T C G T A T A C G G A C T A G C T C A T G A G T C G T C A A C G T A C T G G T C A C T G A A T C G
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.770
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.9 +/- 26.3bp
Average Position of motif in Background47.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTCATGMAACTA--
--ATATGCAAATNNN
 A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTCATGMAACTA
--TTATGCAAAT-
 A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATGMAACTA
NANTTCATTGAATTA
 A C G T A C G T A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTTCATGMAACTA
-MTGATGCAAT--
 A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTTCATGMAACTA
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTCATGMAACTA
-ATGATGCAAT--
 A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTTCATGMAACTA-
---AAGGCAAGTGT
 A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTTCATGMAACTA
ACATTCATGACACG-
 A C G T A C G T A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTTCATGMAACTA
TBGCACGCAA---
 A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTTCATGMAACTA
GACCACATTCATACAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A G T C C G T A A C G T A C T G G T A C C T G A C G T A A T G C A C G T T C G A
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T