Information for 17-AGGACAATGTGCCAAG (Motif 33)

G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C T G A G T C C G T A A G T C G C T A A G C T A C G T A C T G A C G T A G T C G T A C A C G T
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.8 +/- 23.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:forward strand
Alignment:AGGACAATGTGCCAAG-
-------GGTGCCAAGT
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.63
Offset:7
Orientation:forward strand
Alignment:AGGACAATGTGCCAAG
-------CGTGCCAAG
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGACAATGTGCCAAG
-TGGCACCATGCCAA-
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGACAATGTGCCAAG
TTGGCANNNTGCCAAG
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:8
Orientation:forward strand
Alignment:AGGACAATGTGCCAAG
--------TTGCCAAG
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGACAATGTGCCAAG
GTAGGTCACTGGGTCA--
 A C G T A C G T G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:AGGACAATGTGCCAAG
---------TGCCAA-
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGGACAATGTGCCAAG
--GACAATGNN-----
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGACAATGTGCCAAG
NAGGTCACNNTGACC--
 A C G T G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.57
Offset:8
Orientation:forward strand
Alignment:AGGACAATGTGCCAAG-
--------ATGCCAACC
 G T C A A C T G A C T G G T C A A G T C C G T A C T G A C A G T A C T G C G A T A C T G A G T C A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C