Information for 9-CCTGACCTGACTW (Motif 20)

A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
Reverse Opposite:
G C A T C T G A A C T G C G A T A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C T G C T A G
p-value:1e-10
log p-value:-2.394e+01
Information Content per bp:1.842
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.2 +/- 21.6bp
Average Position of motif in Background40.6 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTGACTW
--TGACCTYA---
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTGACTW
--TGACCT-----
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTGACCTGACTW
CCTCACCTG----
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTGACTW
--TGACCYCT---
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTGACTW
-GTGACCTT----
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTGACTW
--TGACCTTGAT-
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGACCTGACTW-
GATGACGTGGCANT
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTGACCTGACTW
CNNTTGACCTTTG--
 A C G T A C G T A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCTGACCTGACTW-
NNNNTGACCCGGCGCG
 A C G T A C G T A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTGACCTGACTW-
--TGACCTTTNCNT
 A G T C G T A C A C G T A C T G G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T