Information for 2-AAGATGGCGGYKCCCW (Motif 2)

G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
Reverse Opposite:
C G A T A T C G C T A G C T A G T G A C C T A G G T A C T G A C C T A G G T A C A G T C G T C A A C G T A G T C A C G T A C G T
p-value:1e-31
log p-value:-7.355e+01
Information Content per bp:1.725
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.7 +/- 20.8bp
Average Position of motif in Background49.2 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGGYKCCCW
CAAGATGGCGGC-----
 A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGGYKCCCW
CAAGATGGCGGC-----
 A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAGATGGCGGYKCCCW
-TAATGGCGGNC----
 G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGGYKCCCW
AACAGATGGC--------
 A C G T A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAGATGGCGGYKCCCW
AAGGCCAGATGGTCCGG----
 A C G T A C G T A C G T A C G T A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGGYKCCCW
AACAGATGGT--------
 A C G T A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGATGGCGGYKCCCW
NAGANTGGCGGGGNGNA
 A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAGATGGCGGYKCCCW
NNNATTGGGGGTNTCCT
 A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AAGATGGCGGYKCCCW
VRAACAATGG---------
 A C G T A C G T A C G T G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAGATGGCGGYKCCCW
---TTGGCA-------
 G T C A T G C A T C A G C G T A A C G T A C T G A C T G A G T C A C T G A C T G G A T C A C T G G A T C A G T C T A G C G C T A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T