Information for 9-AGGTAADTGATAAVCA (Motif 16)

C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
Reverse Opposite:
C G A T C T A G A G C T C G A T A C G T T C G A C G A T A G T C C G T A G A C T C G A T A C G T G T C A A G T C A G T C C G A T
p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.748
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.6 +/- 14.5bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGTAADTGATAAVCA
CAGGTAAGTAT------
 A C G T C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGGTAADTGATAAVCA
----AGGTGTGAAM--
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGGTAADTGATAAVCA
----AGGTGTTAAT--
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGTAADTGATAAVCA
--GGAAGTGAAAST--
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGTAADTGATAAVCA---
--ANANNTGATACCCNATN
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A A C G T A C G T A C G T
A C G T A C G T C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGGTAADTGATAAVCA
----ARNTGACA----
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGGTAADTGATAAVCA
---TAATTGATTA---
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGTAADTGATAAVCA
-CGGAAGTGAAAC---
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGTAADTGATAAVCA
AAGGCAAGTGT------
 A C G T C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGTAADTGATAAVCA
-GCTAATTGCT-----
 C G T A C T A G A C T G C A G T C G T A C G T A C T G A A C G T A C T G C G T A A G C T C G T A G C T A T C G A G A T C C G T A
A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T A C G T A C G T