Information for 7-CACAGTTGGCATT (Motif 13)

A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
Reverse Opposite:
C G T A C T G A A C G T C T A G A G T C A G T C C G T A C T G A A T G C A C G T A C T G C G A T A C T G
p-value:1e-12
log p-value:-2.804e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.7 +/- 20.5bp
Average Position of motif in Background30.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CACAGTTGGCATT
---GGTTGGCAT-
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CACAGTTGGCATT
---NNTTGGCANN
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CACAGTTGGCATT
----NTTGGCANN
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACAGTTGGCATT
AACAGATGGC---
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACAGTTGGCATT
NAACAGCTGG----
 A C G T A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CACAGTTGGCATT
-----TTGGCA--
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CACAGTTGGCATT
----CTTGGCAA-
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACAGTTGGCATT
NNVCAGCTGB----
 A C G T A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAGTTGGCATT
AACAGATGGT---
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACAGTTGGCATT
---NGTGGGCAT-
 A G T C C G T A A G T C C G T A A T C G G A C T A C G T C T A G A C T G A G T C C G T A G A C T A C G T
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T