Information for 7-ACACAACAGGGCAAAT (Motif 11)

C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
Reverse Opposite:
C G T A A G C T A G C T G A C T A C T G A G T C G T A C G T A C A C G T A C T G C G A T C A G T A C T G C A G T A T C G A G C T
p-value:1e-13
log p-value:-3.043e+01
Information Content per bp:1.669
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.2 +/- 26.2bp
Average Position of motif in Background46.2 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACACAACAGGGCAAAT
CCACACAGCAGGAGA---
 A C G T A C G T C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACACAACAGGGCAAAT
-CACAGCAGGGGG---
 C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACACAACAGGGCAAAT
CCACACAGCAGGAGA---
 A C G T A C G T C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACACAACAGGGCAAAT
GAGCACAGCAGGACA---
 A C G T A C G T C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ACACAACAGGGCAAAT
-----TNNGGGCAG--
 C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACACAACAGGGCAAAT
---CAAGATGGCGGC-
 C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

SOX8/MA0868.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ACACAACAGGGCAAAT----
----AACACTGCACATTGTT
 C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ACACAACAGGGCAAAT
------NATGGAAAAN
 C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACACAACAGGGCAAAT
AACACCAAAACAAAGGA---
 A C G T A C G T A C G T A C G T C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:ACACAACAGGGCAAAT
------AATGGAAAAT
 C T G A A T G C G T C A A G T C G T C A G C T A T A G C G T C A C A T G A C T G C T A G G T A C C G T A C T G A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T