Information for 5-GCTTTWATNTTCACCT (Motif 8)

A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A T C G C G T A G T C A C G T A T C G A C G A T C G A T C G T A T C G A C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.778
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 25.2bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:GCTTTWATNTTCACCT--
----------TGACCTYA
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GCTTTWATNTTCACCT-
---------GTGACCTT
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GCTTTWATNTTCACCT---
---------NTGACCTTGA
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCTTTWATNTTCACCT-
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:GCTTTWATNTTCACCT----
----------TGACCTTGAT
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:GCTTTWATNTTCACCT
----------TGACCT
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCTTTWATNTTCACCT---
------CNNTTGACCTTTG
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GCTTTWATNTTCACCT---
---------ATGACCTTGA
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTWATNTTCACCT
TGACCTTTANTTGACCT
 A C G T A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GCTTTWATNTTCACCT---
---------NNCACCTGNN
 A C T G A G T C A C G T A G C T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A