Information for 9-CAGATGGCAGATG (Motif 6)

A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
Reverse Opposite:
G A T C G T C A C A G T A G T C A C G T A C T G A G T C G A T C G T C A C G A T A G T C A C G T A T C G
p-value:1e-11
log p-value:-2.586e+01
Information Content per bp:1.782
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif78.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.9 +/- 23.3bp
Average Position of motif in Background52.4 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGCAGATG
AACAGATGGC-----
 A C G T A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGCAGATG
AACAGATGGT-----
 A C G T A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CAGATGGCAGATG
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGCAGATG
AACAKATGGY-----
 A C G T A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CAGATGGCAGATG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAGATGGCAGATG
VNAVCAGCTGGC-----
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGATGGCAGATG
CAAGATGGCGGC--
 A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGATGGCAGATG
-GGTTGGCAT---
 A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGATGGCAGATG
CAAGATGGCGGC--
 A C G T A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGATGGCAGATG
CAAAGGTCAG---
 A T G C C G T A A C T G C G T A A C G T C A T G A C T G A G T C G T C A T A C G G C T A A C G T C A T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T