Information for 6-CACATCAAAV (Motif 4)

T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G
Reverse Opposite:
A T G C C G A T A C G T G C A T A T C G C G T A C G A T A T C G C G A T A C T G
p-value:1e-21
log p-value:-4.982e+01
Information Content per bp:1.674
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif8.40%
Number of Background Sequences with motif924.2
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets50.2 +/- 23.7bp
Average Position of motif in Background49.6 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CACATCAAAV---
-ACATCAAAGGNA
 T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CACATCAAAV---
AAAGATCAAAGGAA
 A C G T T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CACATCAAAV-
-ACWTCAAAGG
 T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CACATCAAAV-
-ACATCAAAGG
 T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CACATCAAAV-----
NNNAGATCAAAGGANNN
 A C G T A C G T T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CACATCAAAV-----
TATAGATCAAAGGAAAA
 A C G T A C G T T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CACATCAAAV-----
TATAGATCAAAGGAAAA
 A C G T A C G T T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CACATCAAAV-----
NANAGATCAAAGGGNNN
 A C G T A C G T T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CACATCAAAV-
AAAGATCAAAGG
 A C G T T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CACATCAAAV----
TCACCCATCAATAAACA
 A C G T A C G T A C G T T G A C G C T A T A G C C G T A C G A T T A G C C G T A T G C A G C T A T A C G A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A