Information for 2-AAACCACARAHMA (Motif 3)

G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
Reverse Opposite:
A G C T C A G T C A G T A C G T G A C T A C G T A T C G C A G T A C T G A T C G A G C T A G C T C G A T
p-value:1e-59
log p-value:-1.364e+02
Information Content per bp:1.640
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif15.37%
Number of Background Sequences with motif1085.3
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets46.8 +/- 24.7bp
Average Position of motif in Background50.4 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:AAACCACARAHMA
AAACCACANN---
 G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:AAACCACARAHMA
AAACCACAGAN--
 G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-AAACCACARAHMA
NAAACCACAG----
 A C G T G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:AAACCACARAHMA
AAACCACAGC---
 G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-AAACCACARAHMA
NWAACCACADNN--
 A C G T G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AAACCACARAHMA
AAACCGCAAA---
 G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAACCACARAHMA
AAACCGCAA----
 G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAACCACARAHMA
TCCAATCCACA-----
 A C G T A C G T A C G T G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAACCACARAHMA
SSAATCCACANN---
 A C G T A C G T G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAACCACARAHMA
AAATCACAGCA--
 G C T A C T G A C T G A A T G C A G T C G C T A T A G C C G T A C T G A G T C A G T C A G T C A T C G A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T