Information for 14-CCGGCCATTGGCT (Motif 15)

T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C G T A C C G T A G T C A A C G T A C T G A C T G A T G C G T A C A C T G A C T G
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 25.2bp
Average Position of motif in Background47.6 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CCGGCCATTGGCT
---CCGATTGGCT
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CCGGCCATTGGCT---
----TGATTGGCTANN
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGGCCATTGGCT
GTCCGCCATTA---
 A C G T T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGGCCATTGGCT-
CCGCCCAAGGGCAG
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCGGCCATTGGCT
--GGCCATTAAC-
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCGGCCATTGGCT-----
---CTGATTGGTCNATTT
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CCGGCCATTGGCT
-------TTGGCA
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCGGCCATTGGCT
---GCCATCTGTT
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCGGCCATTGGCT-
----CCATTGTTTT
 T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCGGCCATTGGCT---
TGTTCCCATTGTGTACT
 A C G T T A G C A G T C A C T G A T C G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T