Information for 11-CAACGCAATT (Motif 14)

A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A T C G A G T C C T A G G A C T A C G T A C T G
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.5 +/- 27.8bp
Average Position of motif in Background47.1 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Msx3/MA0709.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAACGCAATT--
----CCAATTAA
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

PH0007.1_Barx1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAACGCAATT-------
-AAAGTAATTAGTGAAT
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

MSX1/MA0666.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAACGCAATT--
----CCAATTAG
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAACGCAATT--
----CCAATTAA
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAACGCAATT--
----GCAATTAA
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAACGCAATT--
NNCNNAACAATTNT
 A C G T A C G T A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Dlx4/MA0881.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAACGCAATT--
----CCAATTAC
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

Dlx3/MA0880.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CAACGCAATT--
----CCAATTAC
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

DLX6/MA0882.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAACGCAATT--
----CCAATTAC
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C

Phox2b/MA0681.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAACGCAATT-
TAATTTAATTA
 A G T C C G T A C G T A G A T C T C A G A T G C C G T A C G T A A C G T A C G T A C G T
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A