Information for 2-TCTGTGGCTGCCCCAG (Motif 4)

A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A C T G A C T G A C T G A G T C C G T A A C T G A T G C A T G C C G T A A G T C C G T A A C T G G T C A
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.882
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 18.1bp
Average Position of motif in Background44.5 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCTGTGGCTGCCCCAG---
---GGGTGTGCCCAAAAGG
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCTGTGGCTGCCCCAG
GTCTGTGGTTT------
 A C G T A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TCTGTGGCTGCCCCAG
-------ATGCCCACC
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCTGTGGCTGCCCCAG
-CTGCGCATGCGC---
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCTGTGGCTGCCCCAG
TCGGTGGTCGCN----
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TCTGTGGCTGCCCCAG
---GGGGATTCCCCC-
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TCTGTGGCTGCCCCAG
--AGGGGATTCCCCT-
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TCTGTGGCTGCCCCAG
---GCGCCTGCGCA--
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G
A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TCTGTGGCTGCCCCAG---
--------AGCCTCAGGCA
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TCTGTGGCTGCCCCAG---
---ATCCCCGCCCCTAAAA
 A C G T A G T C G A C T A C T G A C G T A T C G A T C G G T A C A C G T A C T G A G T C A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A