p-value: | 1e-14 |
log p-value: | -3.413e+01 |
Information Content per bp: | 1.859 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.96% |
Number of Background Sequences with motif | 3.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.6 +/- 21.4bp |
Average Position of motif in Background | 39.3 +/- 11.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCACCCTGCCGTGGGC -CCCCCTGCTGTG--- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCACCCTGCCGTGGGC GGCCYCCTGCTGDGH-- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCACCCTGCCGTGGGC GACCCCCCGCTGTG--- |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCACCCTGCCGTGGGC GACCCCCCGCTGCGC-- |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCACCCTGCCGTGGGC GACCCCCCGCTGTGC-- |
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TFAP2A/MA0003.3/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCACCCTGCCGTGGGC- ------NGCCTGAGGCN |
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TFAP2B(var.2)/MA0812.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCACCCTGCCGTGGGC- ------TGCCTGAGGCN |
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TFAP2C(var.2)/MA0814.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCACCCTGCCGTGGGC- ------NGCCTNAGGCN |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCACCCTGCCGTGGGC -TNTCCTGCTGTGNNG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCACCCTGCCGTGGGC -TCNCCTGCTGNGNNN |
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