Information for 2-TTCCCTGGGCATCTGC (Motif 4)

A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A C T G G C T A A C G T A T C G A G T C A G T C A G T C C G T A A C T G A C T G A T C G G T C A C G T A
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 27.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTCCCTGGGCATCTGC
-WDNCTGGGCA-----
 A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTCCCTGGGCATCTGC
GTCCCCAGGGGA-----
 A C G T A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTCCCTGGGCATCTGC
TTGCCATGGCAACN--
 A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTCCCTGGGCATCTGC
ATGCCCGGGCATGT--
 A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCTGGGCATCTGC
GTTGCCATGGCAACCG-
 A C G T A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTCCCTGGGCATCTGC
-TCCCNNGGGACN---
 A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTCCCTGGGCATCTGC
---NGTGGGCAT----
 A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTCCCTGGGCATCTGC
GTTGCCATGGCAAC---
 A C G T A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCCTGGGCATCTGC
TTGCCATGGCAACC--
 A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCTGGGCATCTGC
ANTCCCTNGGGAAT---
 A C G T A C G T A C G T A T G C A G T C A G T C A C G T A C T G A C T G A C T G A T G C C G T A C A G T A G T C C G A T A T C G A G T C
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T