Information for 17-GATGGACGTCCAT (Motif 30)

A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T A G T C A G T C C G T A A C G T G T A C
p-value:1e-4
log p-value:-9.389e+00
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 26.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GATGGACGTCCAT--
NNNTNGTACGTAANNNN
 A C G T A C G T A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GATGGACGTCCAT--
NNNTNGTACGTAANNNN
 A C G T A C G T A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GATGGACGTCCAT-
AYATGYATATGCATR
 A C G T A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GATGGACGTCCAT
--BGCACGTA---
 A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GATGGACGTCCAT---
-ATGAATATTCATGAG
 A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GATGGACGTCCAT
---TGACGT----
 A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GATGGACGTCCAT
---GGACGTGC--
 A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GATGGACGTCCAT---
TCTTTGGCGTACCCTAA
 A C G T A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GATGGACGTCCAT
---GCACGTACCC
 A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GATGGACGTCCAT
---GCACGTAY--
 A C T G C G T A A C G T A C T G A C T G C G T A A G T C A C T G A C G T G T A C A G T C C G T A A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T