Information for 1-GWGCGTMCYKGCG (Motif 3)

A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C T G C A C T A G A C T G A C T G C G T A A G T C A C T G A G T C C G T A A G T C
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.3 +/- 22.7bp
Average Position of motif in Background32.3 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GWGCGTMCYKGCG
NNNTNGTACGTAANNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C A C G T

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GWGCGTMCYKGCG
NNNTNGTACGTAANNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GWGCGTMCYKGCG
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GWGCGTMCYKGCG
TTGCGTGCVA---
 A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GWGCGTMCYKGCG
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GWGCGTMCYKGCG
-TGCGTG------
 A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GWGCGTMCYKGCG
--CTGTTCCTGG-
 A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GWGCGTMCYKGCG
NNNTNGGGCGTATNNTN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----GWGCGTMCYKGCG
TTGGGGGCGCCCCTAG-
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----GWGCGTMCYKGCG
TGGCGCGCGCGCCTGA-
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G T C A C T G A C G T G T A C A G T C A G T C A C G T A C T G A G T C A C T G
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T