Information for 5-GGCCAAAAGG (Motif 16)

C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G C T A C G T A C G T A C T G A C T G G T A C G T A C
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.873
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif69.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets56.2 +/- 20.3bp
Average Position of motif in Background58.6 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGG----
AAGGTCAAAAGGTCAA
 A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGG---
GAGGTCAAAAGGTCA
 A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGCCAAAAGG-
ARGAGGMCAAAATGW
 A C G T A C G T A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAAAGG---
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGCCAAAAGG
TGCCAA----
 C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGG
CGTGCCAAG---
 A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCCAAAAGG
AGCCAATCGG
 C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGG------
GAGGTCAAAAGGTCAATG
 A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGG
GGTGCCAAGT--
 A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAAAGG--
GGGGCCCAAGGGGG
 A C G T A C G T C A T G A C T G A G T C A G T C G T C A T G C A T C G A C G T A A C T G A C T G A C G T A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G