Information for 9-CTGAAAGACTGCT (Motif 7)

A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G A C G T A T G C A C G T A C G T A C G T A G T C G T C A A C T G
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 24.1bp
Average Position of motif in Background29.8 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGAAAGACTGCT
AGGTGNCAGACAG--
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGAAAGACTGCT---
-AGAGRRACAGCWGAC
 A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGAAAGACTGCT
NTGATTGACAGN-
 A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGAAAGACTGCT
AGGTGHCAGACA---
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGAAAGACTGCT
-TGAGTGACAGSC
 A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGAAAGACTGCT
BTGABTGACAGS-
 A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAGACTGCT
ACTGAAACCA----
 A C G T A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGAAAGACTGCT--
---CAAGACGCCTTA
 A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGAAAGACTGCT----
GATATTGACAGCTGCGT
 A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTGAAAGACTGCT-
------AACAGCTG
 A G T C A C G T A C T G C G T A C G T A C G T A T A C G G T C A A G T C C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G