Information for 2-DNGGHTGTGGTTW (Motif 2)

C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
Reverse Opposite:
G C T A C T G A T C G A A G T C A G T C C G T A A G T C C G T A C A T G T G A C G T A C C T G A G T A C
p-value:1e-96
log p-value:-2.227e+02
Information Content per bp:1.587
Number of Target Sequences with motif248.0
Percentage of Target Sequences with motif33.16%
Number of Background Sequences with motif3152.9
Percentage of Background Sequences with motif7.04%
Average Position of motif in Targets49.6 +/- 26.7bp
Average Position of motif in Background50.2 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:DNGGHTGTGGTTW-
--NNHTGTGGTTWN
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.95
Offset:2
Orientation:forward strand
Alignment:DNGGHTGTGGTTW
--GTCTGTGGTTT
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.94
Offset:3
Orientation:forward strand
Alignment:DNGGHTGTGGTTW
---GCTGTGGTTT
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:DNGGHTGTGGTTW
---NNTGTGGTTT
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.93
Offset:4
Orientation:reverse strand
Alignment:DNGGHTGTGGTTW-
----CTGTGGTTTN
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:DNGGHTGTGGTTW
---TTTGCGGTTT
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:DNGGHTGTGGTTW
----TTGCGGTTT
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.78
Offset:6
Orientation:reverse strand
Alignment:DNGGHTGTGGTTW
------GTGGAT-
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-DNGGHTGTGGTTW
ACAGGATGTGGT--
 A C G T C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:DNGGHTGTGGTTW
NTGGGTGTGGCC-
 C A T G G A C T C A T G A C T G G T A C C G A T A C T G C G A T A C T G A C T G A G C T G A C T C G A T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T