Information for 2-WGAGAYAAAAGGGAGC (Motif 3)

G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
Reverse Opposite:
A T C G A G T C A C G T A T G C A T G C A G T C A G C T A C G T C G A T A G C T T C A G G C A T A G T C A C G T A G T C C G T A
p-value:1e-15
log p-value:-3.520e+01
Information Content per bp:1.747
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.9 +/- 28.0bp
Average Position of motif in Background50.6 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:10
Orientation:reverse strand
Alignment:WGAGAYAAAAGGGAGC
----------CGGAGC
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WGAGAYAAAAGGGAGC-----------
--RGGCAMTAGGGAGCCATRGAAGGTK
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:WGAGAYAAAAGGGAGC----
----------GGGAGGACNG
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:WGAGAYAAAAGGGAGC
--AGATAAGA------
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WGAGAYAAAAGGGAGC
AAAGATCAAAGGGTT-
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:WGAGAYAAAAGGGAGC
--ACATCAAAGGNA--
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-WGAGAYAAAAGGGAGC
NNGAGATAAGA------
 A C G T G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:WGAGAYAAAAGGGAGC
TGAGTCA---------
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:WGAGAYAAAAGGGAGC
AAAGATCAAAGGAA--
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:WGAGAYAAAAGGGAGC
TATGTAAACANG----
 G C A T A C T G C G T A A C T G C G T A A G T C C T G A C G T A T G C A C T G A C T A G A T C G A T C G C G T A C T A G A T G C
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T