Information for 19-GGTCTCTGTVCTTTCC (Motif 26)

A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C
Reverse Opposite:
A C T G A T C G C G T A C T G A C T G A C T A G A C T G G C T A T G A C G T C A T C A G C G T A A C T G T C G A A G T C G T A C
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.687
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif46.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets63.3 +/- 24.0bp
Average Position of motif in Background48.9 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTCTCTGTVCTTTCC
AGGTCTCTAACC-----
 A C G T A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTCTGTVCTTTCC
TGGACTTTGNNCTNTG-
 A C G T A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTCTGTVCTTTCC
NAGGTCANTGACCT----
 A C G T A C G T A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTCTGTVCTTTCC
TGGACTTTGNNCTCN--
 A C G T A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGTCTCTGTVCTTTCC--
------TGACCTTTNCNT
 A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGTCTCTGTVCTTTCC
----ACTTTCGTTTCT
 A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C
A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GGTCTCTGTVCTTTCC---
---------ATTTTCCATT
 A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGTCTCTGTVCTTTCC
-----CTGACCTTTG-
 A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGTCTCTGTVCTTTCC-
-----GTTTCACTTCCG
 A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GGTCTCTGTVCTTTCC---
---------ATTTTCCATT
 A C T G A C T G A C G T G T A C G A C T A G T C A C G T A C T G C A G T T G A C A G T C A G C T A G C T A C G T A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T