Information for 18-CCTGAGWAGGRCT (Motif 24)

A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T A G T C A G T C A C G T C G A T A G T C A C G T A G T C C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 16.3bp
Average Position of motif in Background57.8 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTGAGWAGGRCT--
TGCGGAGTGGGACTGG
 A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTGAGWAGGRCT
CCATATATGGNA-
 A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCTGAGWAGGRCT-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTGAGWAGGRCT
CSTGGGAAAD---
 A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCTGAGWAGGRCT
TTCCKNAGAA-----
 A C G T A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CCTGAGWAGGRCT--
-------AGGCCTNG
 A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTGAGWAGGRCT
GCTGTG-------
 A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCTGAGWAGGRCT
WDNCTGGGCA-----
 A C G T A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CCTGAGWAGGRCT
CATTTCCTGAGAAAT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCTGAGWAGGRCT
CTTGAGTGGCT--
 A G T C A G T C A C G T A C T G C G T A A C T G C G A T G T C A A C T G A C T G C T A G A G T C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T