Information for 16-CTTCCTAHAAGAAGCC (Motif 19)

G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
Reverse Opposite:
A C T G A C T G G A T C A C G T A C G T A G T C A G C T A C G T C G T A A C G T C G T A C T A G A C T G T G C A C G T A A C T G
p-value:1e-9
log p-value:-2.107e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets68.0 +/- 24.1bp
Average Position of motif in Background53.0 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTCCTAHAAGAAGCC
TTTCCCAGAAN-----
 G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCTAHAAGAAGCC
NNNTTTCCTGGAAA-----
 A C G T A C G T A C G T G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTCCTAHAAGAAGCC
TTTCCTGGAAA-----
 G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTTCCTAHAAGAAGCC
NNCTTCCNGGAAGN----
 A C G T A C G T G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTCCTAHAAGAAGCC
NTTTCCNGGAAA-----
 A C G T G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTTCCTAHAAGAAGCC
CTTCCNGGAA------
 G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTTCCTAHAAGAAGCC
---CCAATAAAAC---
 G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTTCCTAHAAGAAGCC
TCCATCCCATAATACTC-
 A C G T A C G T G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTCCTAHAAGAAGCC
ATTTCCAAGAA------
 A C G T G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTCCTAHAAGAAGCC
CTACCAATAAAATTCT
 G T A C A C G T A C G T G T A C A G T C A C G T T G C A G A C T T G C A C T G A C T A G C G T A T C G A C A T G G T A C G T A C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T