Information for 3-CGGGAGCGGSTGGGGG (Motif 5)

A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
Reverse Opposite:
G T A C A T G C G T A C A T G C G T A C G T C A T A C G G T A C G A T C A T C G A G T C A G C T A T G C A G T C T A G C A T C G
p-value:1e-6
log p-value:-1.582e+01
Information Content per bp:1.659
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif150.2
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets45.0 +/- 18.7bp
Average Position of motif in Background48.0 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGGAGCGGSTGGGGG-
NNNNAGCAGCTGCTGAN
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGGAGCGGSTGGGGG
---SDGCAGGTGCNS-
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCGGSTGGGGG
-NGNGACAGCTGCN--
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGGGAGCGGSTGGGGG
----GACAGCTGCAG-
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCGGSTGGGGG
-GGGGGGGGGGGGGGA
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGGAGCGGSTGGGGG
--GGCGGGGGCGGGGG
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGGGAGCGGSTGGGGG
----AACAGCTGCAG-
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGGGAGCGGSTGGGGG--
---NCGCAGCGGGGGGTC
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CGGGAGCGGSTGGGGG
--------GGGGGGGG
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGGGAGCGGSTGGGGG
---CAGCAGCTGN---
 A T G C A T C G C T A G T A C G C T G A C T A G T A G C C A T G A C T G A T G C A C G T A C T G A T C G C A T G A T C G A C T G
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T