Information for 2-AGVGVTCGDTGTGTGC (Motif 4)

C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A G T C G T C A A T G C C G T A G C T A A T G C A T C G G T C A A C G T G T A C A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.732
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets72.0 +/- 15.0bp
Average Position of motif in Background47.4 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGVGVTCGDTGTGTGC----
----NNGCGTGTGTGCNGCN
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGVGVTCGDTGTGTGC----
----NNNNTTGTGTGCTTNN
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AGVGVTCGDTGTGTGC--
--------TTGCGTGCVA
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGVGVTCGDTGTGTGC
----GGGGGTGTGTCC
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C
A C G T A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGVGVTCGDTGTGTGC
AGGVNCCTTTGT----
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGVGVTCGDTGTGTGC--
-------CTTGAGTGGCT
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AGVGVTCGDTGTGTGC-------
------NTNTATGTGCACATNNN
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGVGVTCGDTGTGTGC
-----TGCGTGGGYG-
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.47
Offset:5
Orientation:forward strand
Alignment:AGVGVTCGDTGTGTGC-----
-----GGGCCGTGTGCAAAAA
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.47
Offset:9
Orientation:forward strand
Alignment:AGVGVTCGDTGTGTGC
---------TGCGTG-
 C G T A A C T G T C G A A C T G T C G A A C G T A T G C A T C G C A G T A C G T A T C G A C G T A C T G C G A T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T