Information for 3-AGCAGCTGTA (Motif 3)

G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
Reverse Opposite:
C G A T T G C A A G T C C G T A A T C G G A T C C G A T A C T G A G T C C G A T
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.649
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif40.28%
Number of Background Sequences with motif5107.7
Percentage of Background Sequences with motif10.83%
Average Position of motif in Targets49.1 +/- 23.1bp
Average Position of motif in Background48.9 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:AGCAGCTGTA
AGCAGCTGCT
 G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGCTGTA---
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCTGTA
CAGCAGCTGN-
 A C G T G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGCTGTA
NNAGCAGCTGCT
 A C G T A C G T G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:AGCAGCTGTA-
-GCAGCTGTNN
 G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A A C G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCTGTA
NAACAGCTGT-
 A C G T G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGTA
ANCAGCTG--
 G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AGCAGCTGTA
BAACAGCTGT-
 A C G T G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCTGTA
NNGCAGCTGTT
 A C G T G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCTGTA
NNGCAGCTGTC
 A C G T G C T A A C T G T G A C C G T A C T A G T A G C C G A T T C A G A C G T G C T A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C