Information for 1-WAAACCWCAD (Motif 1)

G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G
Reverse Opposite:
G A T C C G A T A T C G G C A T C T A G A C T G A G C T G C A T A C G T C G T A
p-value:1e-15
log p-value:-3.641e+01
Information Content per bp:1.623
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif34.72%
Number of Background Sequences with motif2033.6
Percentage of Background Sequences with motif4.31%
Average Position of motif in Targets43.7 +/- 22.8bp
Average Position of motif in Background49.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:WAAACCWCAD-
-AAACCACANN
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:WAAACCWCAD
NAAACCACAG
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:WAAACCWCAD--
-AAACCACAGAN
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:WAAACCWCAD-
-AAACCACAGC
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.88
Offset:1
Orientation:forward strand
Alignment:WAAACCWCAD
-AAACCGCAA
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:forward strand
Alignment:WAAACCWCAD-
-AAACCGCAAA
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.87
Offset:0
Orientation:forward strand
Alignment:WAAACCWCAD--
NWAACCACADNN
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:WAAACCWCAD--
-AAATCACAGCA
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:WAAACCWCAD
--AACCGANA
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:WAAACCWCAD
--ATCCAC--
 G C A T T G C A C G T A C T G A A G T C A G T C C G T A T A G C G C T A C T A G
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T