Information for 8-CCCACAAAGCACC (Motif 7)

A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G C T A G A C G T T C A G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 20.7bp
Average Position of motif in Background43.0 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCCACAAAGCACC-
TACCCACAATGCATTG
A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCCACAAAGCACC--
---ACAAAGGNBCCT
A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCCACAAAGCACC
---ACAAAG----
A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCACAAAGCACC--------
-CCCCAAACCACCCCCCCCCA
A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCCACAAAGCACC
VRRACAAWGG---
A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCACAAAGCACC
AAACAGACAAAGGAAT
A C G T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCACAAAGCACC
--RACAAWGG---
A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCACAAAGCACC
GACCCCCCACGAAG----
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCACAAAGCACC
NWAACCACADNN----
A C G T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCACAAAGCACC
ATTTCCCAGVAKSCY--
A C G T A C G T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T