Information for 16-CCAACCCACT (Motif 17)

A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.429e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.2 +/- 25.2bp
Average Position of motif in Background56.3 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCAACCCACT
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAACCCACT--
SSAATCCACANN
 A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCAACCCACT---
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCAACCCACT-------
-TAAGCCACTTGAAATT
 A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCAACCCACT--
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCAACCCACT-------
-TAAGCCACTTGAAATT
 A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCAACCCACT-------
-TAAGCCACTTAACATT
 A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAACCCACT-------
-TAAGCCACTTGAATTT
 A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAACCCACT
TCCAATCCACA
 A C G T A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAACCCACT
GCCACRCCCACY
 A C G T A C G T A G T C A G T C C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T