Information for 15-CAAYCAMRGC (Motif 15)

A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
Reverse Opposite:
C T A G A G T C A G C T A C T G A C G T C T A G C T G A A G C T C G A T C T A G
p-value:1e-6
log p-value:-1.609e+01
Information Content per bp:1.711
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif336.2
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets53.9 +/- 24.5bp
Average Position of motif in Background48.5 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CAAYCAMRGC
AAATCACTGC
 A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAAYCAMRGC-
AAATCACAGCA
 A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAAYCAMRGC
AAACCACAGC
 A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAAYCAMRGC
CCAATCAA---
 A C G T A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAAYCAMRGC
----CACAGN
 A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAYCAMRGC
NAAACCACAG-
 A C G T A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAYCAMRGC
CAAATCACTG-
 A C G T A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAYCAMRGC-
AAACCACAGAN
 A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAYCAMRGC
AAACCACANN
 A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAAYCAMRGC--
--NTCAAGGTCA
 A G T C C G T A C T G A A G C T A G T C G T C A G T A C C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A