Information for 12-ACCTGCCTTTGTK (Motif 14)

T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T
Reverse Opposite:
G T C A C G T A T A G C C G T A T G C A C G T A A C T G A T C G A G T C G C T A A T C G A C T G A G C T
p-value:1e-7
log p-value:-1.620e+01
Information Content per bp:1.743
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif86.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets56.8 +/- 24.8bp
Average Position of motif in Background48.4 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:ACCTGCCTTTGTK
-----CCTTTGTT
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:ACCTGCCTTTGTK--
-----CCTTTGTTTT
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCCTTTGTK
NNACTTGCCTT----
 A C G T A C G T T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.68
Offset:5
Orientation:forward strand
Alignment:ACCTGCCTTTGTK--
-----YCTTTGTTCC
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ACCTGCCTTTGTK--
-----CCWTTGTYYB
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ACCTGCCTTTGTK
-----CCWTTGTY
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.66
Offset:6
Orientation:forward strand
Alignment:ACCTGCCTTTGTK
------CTTTGT-
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACCTGCCTTTGTK
AGGVNCCTTTGT-
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACCTGCCTTTGTK-----
-TNNTCCTTTGTTCTNNT
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ACCTGCCTTTGTK-
----NCCATTGTTC
 T C G A G T A C A T G C C G A T A C T G A T G C A G T C A C G T A C G T C G A T A C T G G C A T C A G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C