Information for 3-TTATAGCAACTYAAMT (Motif 6)

C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
Reverse Opposite:
G T C A A C G T C G A T A C G T C T A G C T G A A T C G A C G T A G C T A T C G A T G C A G C T C G T A A C G T C G T A C G T A
p-value:1e-13
log p-value:-3.004e+01
Information Content per bp:1.731
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.3 +/- 17.2bp
Average Position of motif in Background53.1 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0037.1_Isgf3g_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTATAGCAACTYAAMT
CAAAATCGAAACTAA---
 A C G T A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTATAGCAACTYAAMT
GGAAANTGAAACTNA---
 A C G T A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTATAGCAACTYAAMT
-NATGGAAAAN-----
 C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTATAGCAACTYAAMT
TTAAGAGGAAGTTA---
 A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTATAGCAACTYAAMT
ATAAACCGAAACCAA---
 A C G T A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTATAGCAACTYAAMT
CGTATCGAAACCAAA--
 A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTATAGCAACTYAAMT
SCCTAGCAACAG----
 C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTATAGCAACTYAAMT
AAGATCGGAANTNNNA-
 A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTATAGCAACTYAAMT
TACCATAGCAACGGT---
 A C G T A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TTATAGCAACTYAAMT
CCGCATAGCAACGGA---
 A C G T A C G T C G A T C G A T C G T A C G A T C T G A A T C G T A G C C T G A C G T A A T G C A G C T A G T C C G T A G C T A G T C A A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T