Information for 6-AAAAAAAAAAAAAAAA (Motif 27)

T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A
Reverse Opposite:
G C A T C A G T A G C T A G C T A G C T A G C T A G C T A G C T A C G T A C G T A G C T A C G T A C G T C A G T G A C T A G C T
p-value:1e-2
log p-value:-6.587e+00
Information Content per bp:1.645
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif263.5
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets41.9 +/- 27.8bp
Average Position of motif in Background48.0 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA--
-GTTAAAAAAAAAAATTA
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A A C G T A C G T
A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
TACTGGAAAAAAAA--
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
AACAAACAACAAGAG-
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA-
---AAATAAGAAAAAAC
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA--
-GTTCAAAAAAAAAATTC
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAAAA--
------AAACAAACATTC
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
ATATCAAAACAAAACA
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAAAAAAAAAAA
CAAAAGTAAACAAAG--
 A C G T T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
-AGCCGAAAAAAAAAT
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A
A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA---
--AGAAGAACAAAGGACTA
 T C G A C T G A G T C A T G C A T G C A T C G A G T C A C G T A C T G A T C G A C T G A C T G A T C G A T C G A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A