Information for 17-KCACGCGTGASYT (Motif 26)

A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
Reverse Opposite:
C T G A T C A G A T C G A C G T A G T C G T C A A G T C A C T G A G T C A C T G A C G T A C T G G T C A
p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.887
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.3 +/- 21.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-KCACGCGTGASYT
TTCACGCATGAGTT
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----KCACGCGTGASYT
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:KCACGCGTGASYT
--NCACGTGACN-
 A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-KCACGCGTGASYT-
CTCTCGCGAGATCTG
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:KCACGCGTGASYT
-CACGCA------
 A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----KCACGCGTGASYT
TGCAGTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-KCACGCGTGASYT
GGCACGCGTC----
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:KCACGCGTGASYT
--NCACGTGACN-
 A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KCACGCGTGASYT
TCTCGCGAGAAT-
 A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---KCACGCGTGASYT
GGNTCTCGCGAGAAC-
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G A C G T A C T G C G T A T A G C A G C T A G C T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C A C G T