Information for 12-CCAAAGCTTT (Motif 24)

A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
Reverse Opposite:
G T C A C G T A C T G A C A T G A G T C G C A T A G C T G C A T C T A G T C A G
p-value:1e-6
log p-value:-1.607e+01
Information Content per bp:1.698
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif86.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets59.6 +/- 23.9bp
Average Position of motif in Background52.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CCAAAGCTTT
---AAGCTTG
 A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCAAAGCTTT-
-CNGTGATTTN
 A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T A C G T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAAAGCTTT
TGCTGTGATTT
 A C G T A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAAAGCTTT
ACATCAAAGG---
 A C G T A C G T A C G T A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAAAGCTTT
GCAGTGATTT
 A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCAAAGCTTT
ACWTCAAAGG---
 A C G T A C G T A C G T A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCAAAGCTTT
VRRACAAWGG---
 A C G T A C G T A C G T A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCAAAGCTTT
GGAACAAAGR---
 A C G T A C G T A C G T A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCAAAGCTTT
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCAAAGCTTT
ACAAAG----
 A G T C G A T C C G T A C T G A C G T A A C T G G T A C A G C T G C A T C A G T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T