Information for 10-GCGGGATCCC (Motif 21)

A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
Reverse Opposite:
A C T G C T A G C A T G C G T A C G A T A G T C A G T C A T G C T C A G A T G C
p-value:1e-8
log p-value:-1.859e+01
Information Content per bp:1.826
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif117.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets43.6 +/- 22.7bp
Average Position of motif in Background49.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCGGGATCCC
GGCGGGAARN-
 A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGGGATCCC-
GGGGGAATCCCC
 A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCCC
GGGCGGGACC--
 A C G T A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGATCCC--
AGGGGAATCCCCT
 A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCGGGATCCC
BTKGGCGGGAAA--
 A C G T A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGATCCC--
AGGGGATTCCCCT
 A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C A C G T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCCC
GGGCGGGAAGG-
 A C G T A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCCC
GGGCGGGAAGG-
 A C G T A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGGGATCCC
CWGGCGGGAA---
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGGGATCCC
GGCGGGAAAH-
 A C G T A T C G A G T C T A C G A C T G C T A G C G T A A C G T G T A C A G T C T G A C
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T