Information for 7-GTTTTGCACA (Motif 17)

A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A
Reverse Opposite:
C G A T A C T G A G C T A C T G G T A C C T G A T C G A G T C A T G C A T A G C
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.676
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.99%
Number of Background Sequences with motif342.3
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets41.7 +/- 30.4bp
Average Position of motif in Background46.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTTTTGCACA------
NNTTTGCACACGGCCC
 A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTGCACA--
ANATTTTTGCAANTN
 A C G T A C G T A C G T A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GTTTTGCACA-----
CAGATGTGCACATACGT
 A C G T A C G T A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GTTTTGCACA------
--TTTGCACACGGCAC
 A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTTTGCACA-
-ATTTGCATAT
 A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTGCACA-
GGGATTGCATNN
 A C G T A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTTTTGCACA-----
TACATGTGCACATAAAA
 A C G T A C G T A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTTTTGCACA-
-ATTTGCATAA
 A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTTTTGCACA
-TTTTCCA--
 A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTTTTGCACA-
TTCATTTGCATAT
 A C G T A C G T A T C G A C G T C A G T A G C T A G C T C A T G A G T C T C G A T G A C G C T A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T