Information for 12-CACAKGAGTGKCT (Motif 16)

A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G G T C A A G T C C G T A A G T C A C G T A G T C G T A C A C G T A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.8 +/- 18.3bp
Average Position of motif in Background60.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACAKGAGTGKCT
--CTTGAGTGGCT
 A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACAKGAGTGKCT--
CAAAGGCGTGGCCAG
 A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACAKGAGTGKCT
---TTGAGTGSTT
 A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CACAKGAGTGKCT
--CTYRAGTGSY-
 A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CACAKGAGTGKCT
---TTRAGTGSYK
 A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

TFEC/MA0871.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACAKGAGTGKCT
ATCACGTGAC-----
 A C G T A C G T A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACAKGAGTGKCT
GTCACATGAY-----
 A C G T A C G T A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACAKGAGTGKCT
--CAGGTGAGG--
 A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CACAKGAGTGKCT--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CACAKGAGTGKCT
GGTCACATGAC-----
 A C G T A C G T A C G T A G T C C G T A T A G C C G T A A C T G A C T G C G T A A C T G A C G T A C T G A C G T A G T C A C G T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T