Information for 5-TTCTTTTTGAAGAGCA (Motif 15)

A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C G C A T A G T C A C G T A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T A G C T G A C G T A
p-value:1e-9
log p-value:-2.138e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.4 +/- 13.5bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTTTTTGAAGAGCA
NNNNTTTTTTTTTNAAC----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTTTTTGAAGAGCA
GNATTTTTTTTTTGANC----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCTTTTTGAAGAGCA
TTTTTTTTCNNGTN--
 A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TTCTTTTTGAAGAGCA
----NTTTTACGAGN-
 A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TTCTTTTTGAAGAGCA
----ATTTGAATT---
 A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TTCTTTTTGAAGAGCA
------NTCAAGTGG-
 A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTCTTTTTGAAGAGCA
------BTBRAGTGSN
 A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTCTTTTTGAAGAGCA--
--NAATTTTACGAGNTNN
 A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TTCTTTTTGAAGAGCA
TTTTTTTTTTTTTTCAGGTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TTCTTTTTGAAGAGCA
-----TTTGAAACCG-
 A C G T A G C T A G T C A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A A C T G C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T