Information for 20-KCGGGGWGCSSGT (Motif 21)

A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T
Reverse Opposite:
G T C A A G T C A T G C A T G C A T C G A G T C C G T A A G T C A G T C A G T C A T G C A C T G G T C A
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.8 +/- 21.2bp
Average Position of motif in Background43.0 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KCGGGGWGCSSGT
---CGGAGC----
 A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KCGGGGWGCSSGT
-TGGGGA------
 A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---KCGGGGWGCSSGT
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KCGGGGWGCSSGT--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0100.1_Zfp740_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----KCGGGGWGCSSGT
NANNTGGGGGGGGNGN-
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T
T A G C C T G A C G T A C A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G A C T G A C T G C T A G A T C G C T A G A C G T

KLF16/MA0741.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:KCGGGGWGCSSGT-
---GGGGGCGTGGC
 A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:KCGGGGWGCSSGT
--GGGGNGGGGC-
 A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-KCGGGGWGCSSGT--
NNNGGGGCGCCCCCNN
 A C G T A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----KCGGGGWGCSSGT
NCNCAGCGGGGGGTC---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---KCGGGGWGCSSGT-
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G A C T G A C T G C G A T A C T G A T G C A T C G A T C G A C T G A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T