Information for 17-TTAAAGDKTTAAT (Motif 17)

A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
Reverse Opposite:
C T G A A C G T A C G T C T G A C G T A G T A C G A C T A G T C A C G T A C G T A C G T C G T A C G T A
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.818
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.9 +/- 21.2bp
Average Position of motif in Background57.2 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTAAAGDKTTAAT
GGTTAAACATTAA--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGDKTTAAT
ATTAAA--------
 A C G T A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGDKTTAAT
GCTAAACGGT----
 A C G T A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTAAAGDKTTAAT
NGCAATTAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0088.1_Isl2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTAAAGDKTTAAT
AAATTAATTGATTTNG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTAAAGDKTTAAT
NTAATKGTTT---
 A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGDKTTAAT
GTTAATNATTAA--
 A C G T A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTAAAGDKTTAAT-
ATGAATAATTAATG
 A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

MYBL2/MA0777.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTAAAGDKTTAAT
AACCGTTAAACGGTC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTAAAGDKTTAAT---
ATGCATAATTAATGAG
 A C G T A C G T C G T A C G T A C G T A T A C G C G T A A C T G A C G T A G C T T G C A C G T A A G C T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G