Information for 6-TCAGAACACA (Motif 14)

A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A
Reverse Opposite:
A C G T A C T G A C G T A T C G A G C T C G A T T G A C A C G T A T C G C T G A
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.835
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif123.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets50.3 +/- 27.8bp
Average Position of motif in Background48.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCAGAACACA---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCAGAACACA--
ATGTCACAACAACAC
 A C G T A C G T A C G T A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCAGAACACA---
ATATCAAAACAAAACA
 A C G T A C G T A C G T A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAACACA
TATCATTAGAACGCT
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCAGAACACA-
CAAACAACAACACCT
 A C G T A C G T A C G T A C G T A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAGAACACA-
-NAAACCACAG
 A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAGAACACA---
-NWAACCACADNN
 A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGAACACA
CNGTCACGCCAC-
 A C G T A C G T A C G T A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAGAACACA-----
AGCGGCACACACGCAA
 A C G T A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCAGAACACA---
--AAACCACAGAN
 A G C T A T G C C G T A A C T G C G T A C T G A T A G C G T C A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C