Information for 6-AGCGAGACAG (Motif 11)

C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C A G T A T G C A G C T A G T C A T C G A T G C C G A T
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.841
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif109.5
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets50.8 +/- 21.4bp
Average Position of motif in Background48.6 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCGAGACAG
--CCAGACAG
 C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGACAG----
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGACAG
AGGTGNCAGACAG
 A C G T A C G T A C G T C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGCGAGACAG-
-----CACAGN
 C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGACAG--
NNNACCGAGAGTNNN
 A C G T A C G T A C G T C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGACAG
AGGTGHCAGACA-
 A C G T A C G T A C G T C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCGAGACAG--
--CCAGACRSVB
 C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGACAG--
TTGACCGAGAATTCC
 A C G T A C G T A C G T C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGACAG--
GNNACCGAGAATNNN
 A C G T A C G T A C G T C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------AGCGAGACAG
NAGNTCTCGCGAGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C T C A G C T G A A T C G G T C A T G A C C G T A A C T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T