Information for 6-TGACCTGACTVGTTTA (Motif 8)

A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A G T C A C G T A A G T C A C G T C T G A C T A G A C G T A G T C C G T A C T A G C T A G A C G T A G T C G T C A
p-value:1e-10
log p-value:-2.321e+01
Information Content per bp:1.760
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.5 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUX4/MA0468.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA
-----TGATTAAATTA
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA--
---NWTGATTRGRTTAWN
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA
TGACCTARTT------
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA
TGACCT----------
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA
TGACCTYA--------
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA-
----NTGATTAAATTAN
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

PROP1/MA0715.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA
-----TAATTAAATTA
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGACCTGACTVGTTTA
TGACCTTGAT------
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTGACTVGTTTA
GTGACCTT---------
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGACCTGACTVGTTTA
----YTAATYNRATTA
 A C G T A C T G C G T A A G T C A G T C A C G T C T A G G T C A A G T C A G C T T C G A T C A G C G A T A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A